PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.UL9LC
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 295aa    MW: 32979.6 Da    PI: 6.8771
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.UL9LCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.6e-1259101754
                  HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+++N+++  Lr+++P+ +      K++ a+iL  A+eY+k+L
  Araip.UL9LC  59 MAERRRRKKLNDRLYMLRSVVPNiS------KMDRASILGDAIEYMKEL 101
                  79*********************66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.08852101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-1755125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-958101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-1458107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.33E-1259105No hitNo description
Gene3DG3DSA:4.10.280.102.7E-1759115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MVEDSIDNNN NMMKMESESS SKNKNIIGEN NNRNSNNNLN LQKGNNNKKK TGMPAKNLMA  60
ERRRRKKLND RLYMLRSVVP NISKMDRASI LGDAIEYMKE LLQKINDLHN ELQSMPPTAP  120
ASSLHHPLTP TNNNTATLPP AAASLPSRMM MKETASCPTS SLPTPNDQPA RLEKTVFTSF  180
DLIVDLKFLL IQDQEMILNS DNCVHYVKVE VGLREGRGVN IHMFCDQKPG LLLSTLTTLD  240
NLGLDIQQAV ISFFNGFAMD IFRAEQCNEG QDLHPDQIKA ALIEASEASG FHNII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14766KKKTGMPAKNLMAERRRRKK
26067ERRRRKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193511.11e-165PREDICTED: transcription factor SCREAM2-like
SwissprotQ9LSE21e-80ICE1_ARATH; Transcription factor ICE1
TrEMBLA0A0B2QBN99e-96A0A0B2QBN9_GLYSO; Transcription factor ICE1
TrEMBLB8XJY72e-96B8XJY7_SOYBN; Inducer of CBF expression 3
TrEMBLK7KS789e-96K7KS78_SOYBN; Uncharacterized protein
STRINGGLYMA05G38530.23e-95(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2900722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.45e-62bHLH family protein